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  1. Jalview
  2. JAL-3875

"Query 3D Beacons" button / dropdown for structure chooser

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    Details

    • Type: Task
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.11.2.0
    • Component/s: Structures
    • Labels:
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      Description

      3d-beacons requires uniprot accessions, so by default only PDBe is queried when none are available.

      Opening Structure Chooser for :
      1. proteins where some have no uniprot accessions, or uniprot accessions do not have canonical flag set
      - need to prompt user to update via Uniprot dbref fetcher

      2.Proteins where no uniprot accessions exist
      - Provide a filter option that triggers a uniprot dbref fetch followed by 3d-beacons query

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            Assignee:
            jprocter Jim Procter
            Reporter:
            jprocter Jim Procter
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              Created:
              Updated:
              Resolved: