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  1. Jalview
  2. JAL-3201

Per-group clustal colourscheme changes when different groups in the alignment are selected

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 2.10.4, 2.10.5
    • Fix Version/s: 2.11.0
    • Component/s: None
    • Labels:
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      Description

      Affects at least every Jalview release since Maxim was an undergrad ( ;) ).

      Import an alignment and create a couple of groups. Select 'All Groups' in the Colours menu, and then Clustal. Now click any of the groups - note the Clustal colourscheme changes according to the picked group's amino-acid distribution (ie if a colouring rule is met in the group's profile, then those amino acids in other groups will also be coloured according to the rule).
       

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              anonymax Maxim Tsenkov
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