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  1. Jalview
  2. JAL-3095

Sequence highlight in trimmed VARNA 2D structure is incorrect position for sequences with start!=1

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Minor
    • Resolution: Fixed
    • Affects Version/s: 2.10.4, 2.10.4b1
    • Fix Version/s: 2.10.5
    • Component/s: na
    • Labels:
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      Description

      Import an alignment with RNA secondary structure with sequences that have a start position greater than one (e.g. Rfam:RF00014).
      Open the VARNA structure view for the sequence and select the 'trimmed' view. Mouse over the first residue position in the sequence, and try to observe (if any) which residue in the VARNA view is highlighted.

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            Assignee:
            jprocter James Procter
            Reporter:
            jprocter James Procter
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              Updated:
              Resolved: