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  1. Jalview
  2. JAL-2861

Non duplicate duplicate sequence when reading in RFAM

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    Details

    • Type: Story
    • Status: Open
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 2.10.3
    • Fix Version/s: None
    • Component/s: data retrieval services
    • Labels:
    • Environment:
      Windows 7 Life Sciences desktop.

      Description

      Open Jalview.
      Retrieve RFAM -> RF00005
      Sort by ID
      Scroll down to X05914.
      There are two entries with the ID X05914.1/238-306
      The sequences are different.

      I don't know if this is an RFAM issue or a Jalview parsing issue.

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          depends on

          Bug - A problem which impairs or prevents the functions of the product. JAL-2862 Jalview does not import reverse-strand RNA sequences via Stockholm

          • Blocker - Blocks development and/or testing work, production could not run.
          • Open

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              People

              Assignee:
              jprocter James Procter
              Reporter:
              davidmam David Martin
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                Dates

                Created:
                Updated: