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  1. Jalview
  2. JAL-2568

[not reproducible] chimera viewer pane didn't open after selecting structures

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Trivial
    • Resolution: Duplicate
    • Affects Version/s: 2.10.2
    • Fix Version/s: None
    • Component/s: gui, jvdesktop, Structures
    • Labels:

      Description

      Noticed this exception whilst testing new query-history drop down menu for searching PDBe. I had lots of windows open in Jalview before.. not been able to reproduce the message:
      ERROR - Couldn't open Chimera viewer!
      java.lang.IllegalArgumentException: illegal component position
      at java.awt.Container.addImpl(Container.java:1087)
      at javax.swing.JLayeredPane.addImpl(JLayeredPane.java:231)
      at javax.swing.JDesktopPane.addImpl(JDesktopPane.java:484)
      at java.awt.Container.add(Container.java:417)
      at jalview.gui.Desktop.addInternalFrame(Desktop.java:931)
      at jalview.gui.Desktop.addInternalFrame(Desktop.java:752)
      at jalview.gui.ChimeraViewFrame.initChimera(ChimeraViewFrame.java:382)
      at jalview.gui.ChimeraViewFrame.run(ChimeraViewFrame.java:565)
      at java.lang.Thread.run(Thread.java:745)
      WARN - Could not open /var/folders/km/m8_86nbd4bbcpd5s2h8xqtk4_kj190/T/jalview4073998711039045910.cif
      WARN : ext.edu.ucsf.rbvi.strucviz2.ChimeraManager - Could not open /var/folders/km/m8_86nbd4bbcpd5s2h8xqtk4_kj190/T/jalview4073998711039045910.cif

      not sure if the warnings are relevant or not. Query to PDBe was 'torda', and I picked 5cx7.

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Updated:
                Resolved: