Uploaded image for project: 'Jalview'
  1. Jalview
  2. JAL-2428

NJTree refactoring

    XMLWordPrintable

    Details

    • Type: Task
    • Status: Closed
    • Priority: Minor
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.10.2
    • Component/s: analysis
    • Labels:
      None

      Description

      Just a tidy up, not functional change:

      Separate loading tree from file, from computing a tree.
      Make 3 NJ-specific methods overloads in a subclass instead of an if-else choice.
      Use BitSet instead of int[] for Cluster and 'done' field.
      Add Javadoc, tests, as time permits.

        Attachments

          Activity

            People

            Assignee:
            gmungoc Mungo Carstairs
            Reporter:
            gmungoc Mungo Carstairs
            Votes:
            0 Vote for this issue
            Watchers:
            2 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: