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  1. Jalview
  2. JAL-2232

show ena CDS cross references for proteins retrieved from Uniprot

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.10.0
    • Component/s: None
    • Labels:
      None

      Description

      For records retrieved from Uniprot via the sequence fetcher, Jalview only gives the ENA annotated contig reference, rather than the CDS region. This makes retrieving cross-references difficult because occasionally, whole genomes/chromosomes are retrieved when the user only wanted CDS sequence for their proteins of interest.

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          Bug - A problem which impairs or prevents the functions of the product. JAL-2210 Extra sequences appear when showing Uniprot cross-refs from an Ensembl locus view

          • Major - Major loss of function.
          • Closed

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated:
                Resolved: