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  1. Jalview
  2. JAL-2211

Check for and debug use of jalview.datamodel.HiddenColumns.getFullAlignment()

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    Details

    • Type: Task
    • Status: Closed
    • Priority: Blocker
    • Resolution: Cannot Reproduce
    • Affects Version/s: None
    • Fix Version/s: 2.11.0
    • Component/s: Datamodel
    • Labels:

      Description

      Noted in this comment:
      http://issues.jalview.org/browse/JAL-1369?focusedCommentId=15577&page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel#comment-15577

      Dataset/alignment annotation properties will be lost if the AlignmentI from jalview.datamodel.HiddenColumns.getFullAlignment() is used for subsequent operations. Need to check through and fix any issues resulting from this method being used in the code.

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            Assignee:
            jprocter Jim Procter
            Reporter:
            jprocter Jim Procter
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              Updated:
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