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  1. Jalview
  2. JAL-2000

web-install crash on CentOS7 64 bits server

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Won't Fix
    • Affects Version/s: 2.9.0b2
    • Fix Version/s: 2.9.0b2
    • Component/s: None
    • Labels:
      None
    • Environment:
      CentOS7 server
    • Urgency:
      Highest

      Description

      Install with and without JVM is crashing on CentOS7 64 bits server.

      ========================================================
      Extracting the JRE from the installer archive...
      Unpacking the JRE...
      Extracting the installation resources from the installer archive...
      Configuring the installer for this system's environment...

      Launching installer...

      Invocation of this Java Application has caused an InvocationTargetException. This application will now exit. (LAX)

      Stack Trace:
      java.lang.NullPointerException
      at Flexeraaru.ag(Unknown Source)
      at com.zerog.ia.installer.LifeCycleManager.init(Unknown Source)
      at com.zerog.ia.installer.LifeCycleManager.executeApplication(Unknown Source)
      at com.zerog.ia.installer.Main.main(Unknown Source)
      at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
      at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
      at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
      at java.lang.reflect.Method.invoke(Unknown Source)
      at com.zerog.lax.LAX.launch(Unknown Source)
      at com.zerog.lax.LAX.main(Unknown Source)
      ========================================================
      We did as described in the faqs, but no success :

      Can I install Jalview on a server?

      Yes! Just remember to include the '-nodisplay' flag on the command line (and if in doubt, also include java -Djava.awt.headless=true to tell Java not to attempt to use the graphics environment)

      For example:

      java -Djava.awt.headless=true .. jalview.bin.Jalview -nodisplay -open ...

      The latest version of Jalview should run fine on a server without a graphics environment, but some operations may fail. If you encounter problems, submit a bug report.



      java -version
      java version "1.8.0_71"
      Java(TM) SE Runtime Environment (build 1.8.0_71-b15)
      Java HotSpot(TM) 64-Bit Server VM (build 25.71-b15, mixed mode)

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              Assignee:
              jprocter James Procter
              Reporter:
              jmariethoz Julien Mariethoz
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                Created:
                Updated:
                Resolved: