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  1. Jalview
  2. JAL-1948

Retrieve cached Jpred results for a set of sequences

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    Details

    • Type: New Feature
    • Status: Open
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: DAS, JWS-GUI
    • Labels:

      Description

      JPred's proteocache service can provide prediction data for a POSTed sequence, if it has been analysed with Jpred4. Jalview could use this to bulk-annotate alignments with secondary structure prediction results.

      Note: storage model is very similar to existing JPred4 encoding - sets of strings with single character encodings for the different predictor quantities.

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            Assignee:
            jprocter Jim Procter
            Reporter:
            jprocter Jim Procter
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              Dates

              Created:
              Updated: