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  1. Jalview
  2. JAL-1756

Jalview quits immediately after starting up with 'URI is not hierarchical' error

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Blocker
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.9
    • Component/s: Dev and Dep
    • Labels:
      None

      Description

      Build appears to be broken (commits until Merge branch 'bug/JAL-1734_misleading-progress-bar' into develop), so the following may disappear once issues resolved.

      Symptom: launch jalview develop via JNLP, jalview launches then java shuts it down with the following Java Web start launch exception;

      java.lang.IllegalArgumentException: URI is not hierarchical
      at java.io.File.<init>(Unknown Source)
      at jalview.io.BioJsHTMLOutput.syncUpdates(BioJsHTMLOutput.java:222)
      at jalview.io.BioJsHTMLOutput.updateBioJS(BioJsHTMLOutput.java:189)
      at jalview.bin.Jalview.main(Jalview.java:229)
      at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
      at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
      at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
      at java.lang.reflect.Method.invoke(Unknown Source)
      at com.sun.javaws.Launcher.executeApplication(Unknown Source)
      at com.sun.javaws.Launcher.executeMainClass(Unknown Source)
      at com.sun.javaws.Launcher.doLaunchApp(Unknown Source)
      at com.sun.javaws.Launcher.run(Unknown Source)
      at java.lang.Thread.run(Unknown Source)

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              Assignee:
              jprocter Jim Procter
              Reporter:
              jprocter Jim Procter
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                Dates

                Created:
                Updated:
                Resolved: