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Description
As per TODO comment in JalviewJmolBinding.setJalviewColourScheme.
Code tries to construct 'colour' command but only uses peptide residue names.
These don't match the displayed residues (in JMol/Chimera) if the structure is nucleotide.
Example: view 2GIS and use the Jalview Colour menu to Colour Purine/Pyrimidine (or anything else).
Only the 'color white' part of the command takes effect - the model is left entirely white.
Code tries to construct 'colour' command but only uses peptide residue names.
These don't match the displayed residues (in JMol/Chimera) if the structure is nucleotide.
Example: view 2GIS and use the Jalview Colour menu to Colour Purine/Pyrimidine (or anything else).
Only the 'color white' part of the command takes effect - the model is left entirely white.