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  1. Jalview
  2. JAL-1532

aacon normalise option enabled by default but not passed to server

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    Details

    • Type: Bug
    • Status: Open
    • Priority: Minor
    • Resolution: Unresolved
    • Affects Version/s: 2.8.1, 2.8.2, 2.9, 2.10.0
    • Fix Version/s: None
    • Component/s: JWS-GUI, JWS2
    • Labels:
      None
    • Urgency:
      Urgent

      Description

      Steps to reproduce:
      1. launch jalview with a fresh .jalview_properties file and import a simple protein alignment
      2. enable aacon conservation option
      3. notice Shenkin values range beyond 0-1 in annotation
      4. open settings, uncheck normalise and hit start - values do not change

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            Assignee:
            jprocter James Procter
            Reporter:
            jprocter James Procter
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              Dates

              Created:
              Updated: