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  1. Jalview
  2. JAL-1530

file open window for associate PDB doesn't open

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 2.8.1
    • Fix Version/s: 2.8.2
    • Component/s: gui, i18n, jvdesktop
    • Labels:
      None

      Description

      No file chooser opens when trying to associate a local PDB file via the sequence's Structure popup menu.

      Exception in thread "AWT-EventQueue-2" java.lang.NumberFormatException: For input string: "Q93XJ9_SOLTU"
      at java.lang.NumberFormatException.forInputString(NumberFormatException.java:65)
      at java.lang.Integer.parseInt(Integer.java:492)
      at java.lang.Integer.<init>(Integer.java:677)
      at jalview.gui.PopupMenu.pdbFromFile_actionPerformed(PopupMenu.java:1955)
      at jalview.gui.PopupMenu$30.actionPerformed(PopupMenu.java:1061)
      at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2018)
      at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2341)
      at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402)
      at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259)
      at javax.swing.AbstractButton.doClick(AbstractButton.java:376)
      at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:833)
      at com.apple.laf.AquaMenuItemUI.doClick(AquaMenuItemUI.java:157)
      at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:877)
      at java.awt.Component.processMouseEvent(Component.java:6516)
      at javax.swing.JComponent.processMouseEvent(JComponent.java:3320)
      at java.awt.Component.processEvent(Component.java:6281)
      at java.awt.Container.processEvent(Container.java:2229)
      at java.awt.Component.dispatchEventImpl(Component.java:4872)
      at java.awt.Container.dispatchEventImpl(Container.java:2287)
      at java.awt.Component.dispatchEvent(Component.java:4698)
      at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4832)
      at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4492)
      at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4422)
      at java.awt.Container.dispatchEventImpl(Container.java:2273)
      at java.awt.Window.dispatchEventImpl(Window.java:2719)
      at java.awt.Component.dispatchEvent(Component.java:4698)
      at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:735)
      at java.awt.EventQueue.access$200(EventQueue.java:103)
      at java.awt.EventQueue$3.run(EventQueue.java:694)
      at java.awt.EventQueue$3.run(EventQueue.java:692)
      at java.security.AccessController.doPrivileged(Native Method)
      at java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76)
      at java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:87)
      at java.awt.EventQueue$4.run(EventQueue.java:708)
      at java.awt.EventQueue$4.run(EventQueue.java:706)
      at java.security.AccessController.doPrivileged(Native Method)
      at java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76)
      at java.awt.EventQueue.dispatchEvent(EventQueue.java:705)
      at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:242)
      at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:161)
      at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:150)
      at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:146)
      at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:138)
      at java.awt.EventDispatchThread.run(EventDispatchThread.java:91)

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            Assignee:
            jprocter Jim Procter
            Reporter:
            jprocter Jim Procter
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              Dates

              Created:
              Updated:
              Resolved: