Uploaded image for project: 'Jalview'
  1. Jalview
  2. JAL-1474

cannot export features from alignments imported from Jalview/VAMSAS projects

    XMLWordPrintable

    Details

    • Type: Bug
    • Status: Resolved
    • Priority: Critical
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.8.1
    • Component/s: None
    • Labels:
      None
    • Urgency:
      Month of sundays

      Description

      In some cases, importing an alignment from a Jalview project or syncing from VAMSAS results in an alignment that clearly has sequence features, but they cannot be exported to a Jalview or GFF feature file.

      Usually, this bug is also accompanied by messages on the console like
      DEBUG Notice: Merged dataset sequence
      DEBUG Notice: Merged dataset sequence
      DEBUG Notice: Merged dataset sequence
      DEBUG Notice: Merged dataset sequence
      DEBUG Notice: Merged dataset sequence

        Attachments

          Activity

            People

            Assignee:
            jprocter James Procter
            Reporter:
            jprocter James Procter
            Votes:
            0 Vote for this issue
            Watchers:
            1 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: