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  1. Jalview
  2. JAL-1373

sensible precision when calculating consensus percentages

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    Details

    • Type: Improvement
    • Status: Resolved
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.8.1
    • Component/s: analysis, renderer
    • Labels:
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      Description

      When dealing with thousands of sequences, a single digit of precision for the fraction of a particular residue symbol is insufficient, since a single residue variant which is represented 49 times out of a thousand in an alignment will have 0.0% at that level of precision.

      Jalview should give sensible levels of precision for symbol distribution calculations according to the size of the alignment.

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          related with

          Improvement - An improvement or enhancement to an existing feature or task. JAL-1463 efficient encoding of programmatically generated alignment and sequence annotation rows

          • Critical - Crashes, loss of data, severe memory leak.
          • Open

          New Feature - A new feature of the product, which has yet to be developed. JAL-520 annotation label tooltip text needs to be wrapped

          • Major - Major loss of function.
          • Resolved

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Updated:
                Resolved: