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  1. Jalview
  2. JAL-1259

Disorder predictions fail with NPE if no automatic annotation already exists on alignment

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    Details

    • Type: Bug
    • Status: Resolved
    • Priority: Blocker
    • Resolution: Fixed
    • Affects Version/s: 2.8
    • Fix Version/s: 2.8.0b1
    • Component/s: analysis, awt-gui, gui
    • Labels:
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      Description

      If one or more automatic annotations (such as consensus) rows are not already present on the alignment, then Jalview will throw a null pointer exception and blacklist a JABAWS annotation worker that creates new annotation rows.

      1. Disable all conservation/consensus annotation in preferences
      2. import the interleukin alignment
      3. run a disorder prediction such as IUPred
      4. note NPE and lack of annotation added to alignment.

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            Assignee:
            jprocter James Procter
            Reporter:
            jprocter James Procter
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              Created:
              Updated:
              Resolved: