Uploaded image for project: 'Jalview'
  1. Jalview
  2. JAL-1189

fetches of large numbers of IDs from EMBL, EMBLCDS, Uniprot or PDB fail or take a very long time

    XMLWordPrintable

    Details

      Description

      The EBI dbfetch client that jalview uses supports batch queries up to 200 records, but the harness that uses the client does not support batch querying of the service. Need to improve the sequence database fetching harness to support efficient and robust batch querying and parsing.

        Attachments

          Activity

            People

            Assignee:
            jprocter Jim Procter
            Reporter:
            jprocter Jim Procter
            Votes:
            0 Vote for this issue
            Watchers:
            1 Start watching this issue

              Dates

              Created:
              Updated: