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  1. Jalview
  2. JAL-1088

non-fetchable database references displayed in the 'get crossreferences submenu'

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    Details

    • Type: Bug
    • Status: Open
    • Priority: Minor
    • Resolution: Unresolved
    • Affects Version/s: 2.8
    • Fix Version/s: None
    • Labels:
      None

      Description

      This seems to be a regression bug from 2.7 (due to JAL-972, possibly).
      Symptoms: 'Get Cross-References' entry shown in the Calculations menu of the alignment window, and includes cross-references for non-fetchable databases.

      Steps to reproduce:
      0. add internal das sequence and features source: atbdb to jalview's das registry.
      1. import sequence 'atb499' from internal Tbrucei DAS source.
      2. Open calculation menu - GeneDB link will be shown.

      Other info: saving and loading project results in the cross-reference menu entry disappearing, but the sequence has a 'GENEDB' rather than a 'GeneDB' cross reference.

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Created:
                Updated: