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  1. Jalview
  2. JAL-1073

slow fetching and verifying sequence against EMBL genome accessions

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    Details

    • Type: Improvement
    • Status: Open
    • Priority: Minor
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: data retrieval services, Efficiency, na
    • Labels:
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      Description

      If a sequence includes just the chromosome or genome containing that stretch in the sequence ID and is verified against an EMBL record, then it can take a long time for jalview to download and parse the record before matching the sequence against it.

      This process needs to be made more efficient, either by using a faster service, or validating the sequence on the server rather than the client.

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            Assignee:
            jprocter James Procter
            Reporter:
            jprocter James Procter
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              Dates

              Created:
              Updated: