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  1. JABAWS
  2. JWS-106

Input limits for AACons are not implemented correctly

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    Details

    • Type: Bug
    • Status: Open
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 2.1
    • Fix Version/s: None
    • Component/s: None
    • Labels:
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      Description

      When the AACons limits are set as X for a particular number of sequences and columns, the actual limit should be the product of the sequences and columns (X^2). However, for v2.1, the actual limit applied seems to not be this.

      An input set of sequences raised the following error:

      Exception while submitting job to a web server. Exception details are below:
      compbio.metadata.LimitExceededException: Job exceed size limits, maximum number of sequences must be less than 5000000
      and an average sequence length must not exceed 5000000
       However, the task contained 28505 sequences
      and an average sequence length was 3382

      28505*3382 is 96403910 - so greater than either sequence or column limit, but not greater than the product. Upping the seq and column limit by three orders of magnitude allowed the job to run.


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            Assignee:
            drozdets Alexey Drozdetskiy
            Reporter:
            jprocter James Procter
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              Dates

              Created:
              Updated: