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  1. Jalview
  2. JAL-2106

change SequenceI.getSourceDBRef() to getPrimaryDBRefs()

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    Details

    • Type: Task
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.10.0
    • Component/s: None
    • Labels:
      None

      Description

      This is a 'freedom of information' request: set/getSourceDBRef has been added to jalview.datamodel.SequenceI, but I'm not at all clear whether it is:

      1. stored/restored via a Jalview Project.
      2. Sufficient for our needs*.

      * in order for it to be sufficient, we need to document our needs. See comments.

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          Issue Links

          blocks

          Bug - A problem which impairs or prevents the functions of the product. JAL-2154 Wrong start/end on mapped dataset sequence after reloading project

          • Major - Major loss of function.
          • Closed
          related with

          Improvement - An improvement or enhancement to an existing feature or task. JAL-1926 Add source information for Sequences at retrieval

          • Major - Major loss of function.
          • Closed

            Activity

              People

              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated:
                Resolved: