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  1. Jalview
  2. JAL-2001

Refactor ColumnSelection to store ranges rather than individual selected columns

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      Description

      ColumnSelection stores a list of individual selected column numbers.
      (Note this differs from hidden columns which it stores as a list of ranges.)
      This doesn't scale to operations on large sequence (e.g. 'selected columns of genomic sequence with no CDS feature').
      Storing as lists of ranges instead should resolve this.

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          New Feature - A new feature of the product, which has yet to be developed. JAL-1705 Ensembl sequence fetching

          • Major - Major loss of function.
          • Closed
          related with

          Bug - A problem which impairs or prevents the functions of the product. JAL-1722 Jalview becomes slow when large numbers of columns are hidden

          • Major - Major loss of function.
          • Closed

          Task - A task that needs to be done. JAL-2117 interface for jalview.datamodel.ColumnSelection

          • Major - Major loss of function.
          • Open

          Bug - A problem which impairs or prevents the functions of the product. JAL-2172 ColumnSelection.getSelected returns an unordered list, used as if ordered

          • Major - Major loss of function.
          • Closed

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              gmungoc Mungo Carstairs
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