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  1. Jalview
  2. JAL-1813

Peptide secondary structure rendered incorrectly when display text includes 'e' or 'h'

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Minor
    • Resolution: Fixed
    • Affects Version/s: 2.8.2
    • Fix Version/s: 2.9
    • Component/s: None
    • Labels:
      None

      Description

      Reported by Arne Sahm http://www.compbio.dundee.ac.uk/pipermail/jalview-discuss/2015-July/001215.html
      Example: load alignment
      >A
      QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
      >B
      LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
      >C
      KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK

      then load annotations:
      JALVIEW_ANNOTATION

      NO_GRAPH 1,3,5 bugged |||E,1: with e|||||||E,2:with x||||||||||||E,with e,3:with e|||||||||E,with e,4:with x||||||||H,5:with h||||||||H,6:with x||

      annotations labelled 1, 3, 5 are incorrectly rendered.

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              gmungoc Mungo Carstairs
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                Created:
                Updated:
                Resolved: