102030405060708090D.melanogaster.1/1-65D.melanogaster.2/1-63D.melanogaster.3/1-68O.niloticus.1/1-59O.niloticus.2/1-61O.niloticus.3/1-65D.rerio.1/1-66X.laevis.1/1-67G.gallus.1/1-63G.gallus.2/1-60G.gallus.3/1-73M.musculus.1/1-64M.musculus.2/1-64M.musculus.3/1-64M.musculus.4/1-65M.musculus.5/1-66M.musculus.6/1-61M.musculus.7/1-64M.musculus.8/1-67M.musculus.9/1-66M.musculus.10/1-66M.musculus.11/1-63M.musculus.12/1-65M.musculus.13/1-60M.musculus.14/1-67R.norvegicus.1/1-61R.norvegicus.2/1-64R.norvegicus.3/1-67R.norvegicus.4/1-61R.norvegicus.5/1-62R.norvegicus.6/1-67R.norvegicus.7/1-66H.sapiens.1/1-63H.sapiens.2/1-65H.sapiens.3/1-68H.sapiens.4/1-71H.sapiens.5/1-57H.sapiens.6/1-66H.sapiens.7/1-70H.sapiens.8/1-67H.sapiens.9/1-58H.sapiens.10/1-62H.sapiens.11/1-63H.sapiens.12/1-67H.sapiens.13/1-64H.sapiens.14/1-62H.sapiens.15/1-63B.taurus.1/1-64B.taurus.2/1-64B.taurus.3/1-66B.taurus.4/1-64B.taurus.5/1-61B.taurus.6/1-67B.taurus.7/1-61O.aries.1/1-68S.scrofa.1/1-68S.scrofa.2/1-65S.scrofa.3/1-63S.scrofa.4/1-64C.elegans.1/1-64S.mansoni.1/1-67G-AGCC-CU---AUGAUCGAUGAUUGG-CAAA-UCCUCUC--GAGG--A-------ACCGAUC-G-U-UGAGAA--CCCCU-----UUGCCUUC-AUUCAACU-UAUGAGGAUUAUUUCU-UAAA-GGCCUCU---GGC--U-------CGGAAAU-A-G-UCUGAA---CCU--------UAUUGG-UGGCGCU--UAUGACGCAGUUGUCU-UAAA-CUCGAAC--UCGA-GC--------GGGCAA-U-U-GCUGAU---UACG---AUUAACCACG-UUUCUCA---GUGAAGGCUACAGAU-UAAA--CCUCU----GGC-----------CUCUGG-A-G-CCAGAU--GCAUU-------GAAACU-GUUUAUU--AAUGACGGCUACAGAU-UAAA--CCUUU----AGC-----------CUCUGG-A-G-CCAGAU--GCAUU------CAAACAG-UGUCUCU---GUGAAGUUCGGUUUU-UAAA-AGGGUCA---UCC--A-------GAAAACC-G-ACACUGAU--GUUUC------CGACACA-UGUGGUCUUUAUGAAGGCAGGUGCA-GAAA-CUAUGCA---CUA-GU--------GGUGUC-U-G-UCUGAU--GUUUG-------GCCAUG-UGUUUGCA-AAUGACGACCGAUUUU-GAAA-UGGUCUCACGGCC--A-------AAAACUC-GUG-UCCGAC---AUC--------AACCCG-UGUGUUU---AUGAAGAGCACUAAC-AAAA-GAGUAAU-UGACU--C-------AGUUGGU-G-U-UCAGAU--GCU---------CUCACU-AUUUGUC---AUGACAGUCACAGCA-UAAA--GCGCA----GAC-----------GGCUGU-G-A-CCUGAU--UUUAG------AAAAUAU-AUUUCUU--UGUGAUGACCGAUUUU-GAAA-UGGGUUU---CUC--UAAUGCCAGGAAAUC-GUG-UCUGAU---GUUG-----UCAAGUAG-UCACCGA---AUGAUCUGCUCUGGU-CAAA-UCCUUCU---AUG--C------CAGCCAGG-G-U-GGUGAU--GACCC-------GUGACG-UUACAUU--AAUGAGAACAGAAACA-UAAA--CUAUGA-CCUAG-G---------GGUUUC-U-G-UUGGAU--AGCUU-------GUAAUG-GUUCUUC--CAUGAUGGUGUUUCCUCUAAA--UUUGC----ACG-----------GAGAAA-C-A-CCUGAU-UUCCAG-----GAAAAUCG-UGUGCGA---AUGAUAACUACUGAC-GAAA-GAGCUGU-CUGCU--C-------AGUCUGU-G-G-UUGGAU---GUAG------UCACACG-CCGCUUC---AUGACAGGAAGGACU-GAAA-UGUCUUA---GAC--C-----UGUGGUCUU-U-C-CUCGAU--GUUCC------UGCGGCG-UCAGAUG---AUGAUGGCCUGGGCA-GAAA-CCCCAUG--UGGG--C--------CGCCCA-G-G-UUUGAA---CCC--------CUGGCG-UGUCUCU---AUGAAGGAGGGGCCC-GAAG-CCCUUGU---GGG--C--------GGGCCU-C-C-CCUGAG---CCCG----UCUGUGGUU-UUGCAUU--AAUGAGGAUUACACAG-AAAA-CCUUUGU--UAAG-GA-------CUUGUGU-AGA-UCUGAU--AAUUG-------GCAAAC-CGGCACU--CAUGAAGGUCUGCUUG-AAAA-CCAGCCU--GCUG-GU--------GGGGCA-G-U-CCUGAG-GACCUG-------GCGUGC-CGGCACU--CAUGAAGGUCUGCCUG-AAAA-CCAGCCU--GCUG-GU--------GGGGCA-G-U-CCUGAG-GACCUG-------GCGUGU-AUUUGUG--UAUGAUGGUCACAGUG-UAAA--GUUCC----CAC-----------AGCUGU-G-A-CUUGAU--UUUUA----AAAAUGUCC-UCAGCAG--GAUGAUGAGAAGGGCU-GAAA-UGCUGCC--AAAC--C-------AGGUCCU-U-U-UCUGAU--GGUGG-------CUGGGC-AUGCGUC--CAUGAAGUCACUGGCC-UCAA-GCCCAA----GUG-GU--------GGGCAG-U-G-ACAGAA---GA---------GCUGCC-UCUGAUA---AUGAUGUCUCUCCCU-CUAA-CUCCCAGUAAGGA--C--------UGGGAG-A-G-GCUGAACAAACCU-------CAGAGA-UAUUUGUU-UAUGAUGGUCACAGUG-UAAA--GUUCA----CAC-----------AGCUGU-G-A-CUUGAU--UUUUA-------AAAAUG-UUACAUU--GAUGAGAACAGAAACA-UAAA--CUAUGA-CCUAG-G---------GGUUUC-U-G-UUGGAU--AGCUC-------GUAAUU-UUGCAUU--AAUGAGGAUUACACAG-AAAA-CCUUUGU--UAAGGGU--------UUGUGUCG-A-UCUGCU--AAUUG-------GCAAAG-UCAGAUG---AUGACGGCCUGUGCA-GAAA-CCCCCAC-GUGGG--C--------UGC-CA-G-G-UUUGAA---CCC--------CUGGCG-UUUUUCC---AUGACGGUGUUUCCUCUAAA--UUUAC----AUG-----------GAGAAA-C-A-CCUGAU-UUCCAG------AAAAAUG-CCGCUUC---AUGACAGGAAGGACU-GAAA-UGUCUCA-AAGAC--C-----UGUGGUCUU-U-C-UUCGAU--GUUCU-------GCGGCC-CGGCACU--CAUGACGGUCUGCCUG-AAAA-CCAGCCC--GCUG-GU--------GGGGCA-G-U-CCCGAG-GACCUG-------GCGUGG-CCAGAUG---AUGACGACCUGGGUG-GAAA-CCUACCC-UGUGG--G--------CACCCA-U-G-UCCGAG---CCCC-------CUGGCG-UGUGCGG---AUGAUAACUACUGAC-GAAA-GAGUCAU-CGACU--C-------AGUUAGU-G-G-UUGGAU---GUAG------UCACAUG-ACGCUUC---AUGAUAGGAAGGACU-GAAA-AGUCUUG-UGGAC--A-----CCUGGUCUU-U-C-CCUGAU--GUUCU------CGUGGCG-ACUGACAU-UAUGAAGGCCUGUACU-GAAG-ACAGCAA--GCUG--U-------UAGUACA-G-A-CCAGAU--GCUUU--CUUGGCAGGCU-UCACAGA---AUGAUGGCACCUUCC-UAA---ACCCU----CAU-----------GGGUGG-U-G-UCUGAG--AGGC--------GUGAAG-UGUGCGG---AUGAUAACUACUGAC-GAAAGAGUCAUC---GAC--C-----UCAGUUAGU-G-G-UUGGAU---GUAG------UCACAUU-GGCGUCUU-CAUGAGGGAGGGGCCC--AAA-GCCCUUG--UGGG--C--------GGACCU-C-C-CCUGAG---CCUGUCUGAGGGGCCAU-UUGCUUU--AAUGAGAAUAGAAACG-UAAA--CUAUGA-CCUAG-G---------GGUUUC-U-G-UUGGAU-AAUUAG-----CAGUUUAU-AUUUGUU--UAUGAUGGCCACAGCC-UAAA--GUACA----CAC-----------GGCUGU-G-A-CUUGAU---UCA--------AAAGAC-CGGCACU--CAUGACGGCCUGCCUG-CAAA--CCUGC----UGG--U--------GGGGCA-G-A-CCCGAA-AAUCCA-------GCGUGG-CCGGAUG---AUGACGACCUGGGUG-GAAA-CCUACCC-UGUGG--G--------CACCCA-U-G-UCCGAG---CCCC-------CUGGCC-UCUGUUA---AUGACGUCUCUCCCUCUAAA-CCCCAUU-AAGGA--C--------UGGGAG-A-G-GCAGAGCAAGCCU-------CAGAGG-UCACUGC---AUGAUCCGCUCUGGU-CAAA-CCCUUCC---AGG--C------CAGCCAGA-G-U-GGGGAU--GGUCU-------GUGACC-ACUGCUG---AUGACGAACUAUCUC-UAAC-UGGUCUU--GACC--A-------CGAGCUA-G-U-UCUGAA---UU-G-------CAGGGU-UUUCAUC--UAUGAGGGUGUUUCCUCUAAA--CCUACG---AGG-----------GAGGAA-C-A-CCUGAU---CUUA-----CAGAAAAC-UUGCGUU--AAUGAGAACAGAAACG-UAAA--CUAUAA-CCUAG-G---------GGUUUC-U-G-UUGGAU--GGUUG-------GCAACC-UUGCGUU--AAUGAGAACAGAAACG-AAAA--CUAUAA-CCUAG-G---------GGUUUC-U-G-UUGGAU--GGUUG-------GCAACC-CCGGUGCC-UAUGACGGUCUGUCUG-AAAA-CCAGCCC---CUG-GU--------GGGGCA-G-A-CCUGAG-AACCUG-------GCGUGACUUGCGUU--AAUGAGAACAGAAACG-UAAA--CUAUAA-CCUAG-G---------GGUUUC-U-G-UUGGAU--GGUUG-------GCAA-G-CCAGAUG---AUGAGGACCUGUGCG-GAAA-CCCCCCG--CGGG--C--------UGCCCA-U-G-UCUGAG---CCC--------CUGGCG-AUGCGUC--CAUGAAGUCACCAGCC-CCAA-GCCCCUC---GUG-GU--------GGGUGG-U-G-AUGGAA-CCGUCA-----AAGCAGUU-UUUGCCC---AUGAAGGUGUUCCCUCUAAA--CCUAC----GUG-----------GAGGAA-U-G-CCUGAU-GUCCAG-------GAAAAG-ACGCUUC---AUGACAGGAAGGACU-GAAA-UGUCUCU-UGGAC-GC------CUGGUCCU-U-C-CUUGAU--GUUCU------CACGGCG-ACGCUUC---AUGACAGGAAGGACU-GAAA-UGUCUUG-UGGAC-GC------CUGGUCCU-U-C-CCUGAU--GUUCU------CAUGGCC-UGGCACC--CAUGACAGUCUGCCUA-AAAA-CCAGCCC---CUG-GU--------GGGGCA-G-A-CUCGAG-AACCUG-------GCGUGA-UUUUAUC--CAUGAAAGUGUUUCCUCUAAA--CCUAU----GUG-----------GAGGAA-C-A-CCUGAU-GUCCAG------GAAAAUC-UGGCACC--CAUGACAGUCUGCCUA-AAAA-CCAGCC----CUG-GU--------GGGGCA-G-A-CUCGAG-AACCUG-------GCGUGG-AGGCAGCUUUGUGACGACCUUUGGC-UAAA-CUCCAUC--GUGA-GC--------GCCUCU-G-G-UCUGAU---GC---------GCCUCC-UCGCUAU---AUGACGAUGGCAAUC-UCAA--AUGUU----CAU--U--------GGUUGC-C-A-UUUGAU--GAAAUCAGUUUUGUGUGStrucConsensusConsensussecondary structurereference positionssecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structuresecondary structure(-((((-----------((((((((((-------(((------)))-----------))))))-)-)-))------------------)))))GCUUUCAUUUU+AUGACGGCCUGUGCUCUAAAGCCCU+C++CGGAGGGCAAUGCUCAGGGUCACGUGCUCUGAUCAGCUUG+++UUUAG+GAC - - - - - - - - - - - - - - - - - - - _ _ _ _ _ _ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -g.ucucauu..uAUGAuGgccucuccc.uAAA.ucccuuu...ggg..c........gggaga.g.g.cCuGAU..gcuug.......gagac . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .