Details
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Type:
Improvement
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Status: Open
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Priority:
Major
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Resolution: Unresolved
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Affects Version/s: None
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Fix Version/s: None
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Component/s: analysis
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Labels:None
Description
Actions that create groups such as a tree cut operation currently have to calculate conservations for each new group, which can cause perceptible delay.
Any decision as to whether group conservations are needed needs to know about:
* state of group consensus/conservation autoannotation display
* apply to all groups checkbox
* current global colourscheme
If conservation is needed, then it has to be done before the groups are created *or* a visual delay is shown after the groups are created whilst an alignment calculation worker does it's thing.
relevant jalview-dev thread:
http://www.jalview.org/pipermail/jalview-dev/2015-March/thread.html#407
Any decision as to whether group conservations are needed needs to know about:
* state of group consensus/conservation autoannotation display
* apply to all groups checkbox
* current global colourscheme
If conservation is needed, then it has to be done before the groups are created *or* a visual delay is shown after the groups are created whilst an alignment calculation worker does it's thing.
relevant jalview-dev thread:
http://www.jalview.org/pipermail/jalview-dev/2015-March/thread.html#407
Attachments
Issue Links
- blocks
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JAL-961 Instantaneous alignment calculation API that allows extension of range of dynamic alignment analysis calculations by plugins
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- Resolved
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